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I was going to agree with you because it sound the one tank has adults with plants and the other has juvies in the bb setup. However, after giving it some thought, I changed my post. Plants give it that clear look because they are natural bio-filters, but it doesn't mean there's less bacteria. In the BB tank, you'd have no trouble checking the fish for signs of illness and medicating if needed, but in a planted tank with different species, the situation is different. So I'm thinking you should put it in the planted tank (I assume it's an in-tank unit since it's only 9 watts). It would be easier to hide in that tank too.
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